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Class	
  I	
  phosphoinositide	
  3-­-kinases	
  in	
  immunity…	
  

	
  
least	
  in	
  certain	
  cases	
  Ras-­-family	
  proteins	
  might	
  play	
  an	
  active	
  role	
  in	
  recruiting	
  to	
  
membranes	
  catalytic	
  class	
  IA	
  (15)	
  and	
  class	
  IB	
  subunits	
  (10).	
  

                                                                                                                                   	
  
Figure	
   2.	
   Structure	
   of	
   the	
   catalytic	
   and	
   regulatory	
   subunits	
   of	
   mammalian	
   PI3K	
   classes	
   and	
  
subclasses.	
   Size	
   in	
   kDa	
   is	
   indicated	
   in	
   the	
   name	
   of	
   class	
   I	
   PI3K,	
   all	
   proteins	
   are	
   represented	
   at	
   the	
  
same	
   approximate	
   scale.	
   PI3K	
   catalytic	
   subunits	
   contain	
   a	
   common	
   core	
   of	
   one	
   C2	
   domain,	
   one	
  
helical	
   domain,	
   and	
   one	
   catalytic	
   kinase	
   domain.	
   Class	
   IA	
   and	
   IB	
   catalytic	
   subunits	
   (a,	
   ß,	
   d,	
   and	
   ?)	
  
are	
  the	
  product	
  of	
  single	
  genes	
  ;	
  they	
  have	
  two	
  domains	
  N-­-terminal	
  to	
  the	
  core,	
  namely	
  an	
  adaptor	
  
binding	
  domain	
  (ABD)	
  that	
  binds	
  to	
  regulatory	
  subunit,	
  and	
  one	
  Ras-­-binding	
  domain	
  where	
  binding	
  
of	
   Ras	
   family	
   proteins	
   activate	
   the	
   kinase	
   activity.	
   A;	
   B)	
   Class	
   IA	
   catalytic	
   subunits	
   (a,	
   ß,	
   and	
   d)	
  
associate	
   with	
   any	
   class	
   IA	
   regulatory	
   subunits	
   encoded	
   by	
   three	
   different	
   genes.	
   Pik3r1	
   can	
  
produce	
   three	
   different	
   proteins	
   (p85a,	
   p55a	
   and	
   p50a)	
   sharing	
   one	
   Pro-­-rich	
   region,	
   plus	
   one	
   N-­-
terminal	
  and	
  one	
  C-­-terminal	
  SH2	
  domains	
  separated	
  by	
  and	
  inter-­-SH2	
  domain	
  (iSH2)	
  that	
  binds	
  the	
  
ABD	
   domain	
   in	
   the	
   catalytic	
   a,	
   ß,	
   and	
   d	
   subunits.	
   The	
   p85a	
   subunit	
   has	
   one	
   N-­-terminal	
   SH3,	
   one	
  
Proline-­-rich,	
   and	
   one	
   BH	
   (BCR	
   homology)	
   domain;	
   the	
   p85ß	
   subunit	
   coded	
   by	
   the	
   Pik3r2	
   gene	
   is	
  
similar	
  to	
  p85a	
  subunit	
  but	
  has	
  an	
  additional	
  c-­-terminal	
  Pro-­-rich	
  region.	
  The	
  p55?	
  subunit	
  encoded	
  
by	
   Pik3r3	
   and	
   p55a	
   have	
   similar	
   structures.	
   C)	
   Class	
   IB	
   catalytic	
   subunits	
   (p110?)	
   bind	
   to	
   p87	
   or	
  
p101	
   class	
   IB	
   regulatory	
   subunits	
   endowed	
   with	
   domains	
   able	
   of	
   associating	
   to	
   the	
   Ga	
   and	
   Gß	
  
subunits	
   of	
   heterotrimeric	
   Guanine	
   nucleotide-­-binding	
   proteins	
   (G	
   proteins)	
   that	
   initiate	
   signals	
  
delivered	
  by	
  G-­-protein	
  coupled	
  receptors	
  (GPCR).	
  D)	
  Class	
  II	
  PI3Ks	
  do	
  not	
  have	
  regulatory	
  subunits,	
  
and	
   seem	
   to	
   be	
   constitutively	
   bound	
   to	
   intracellular	
   membranes.	
   They	
   have	
   a	
   role	
   in	
   different	
   cell	
  
functions	
  including	
  cell	
  migration,	
  exocytosis,	
  and	
  apoptosis,	
  but	
  the	
  precise	
  mechanisms	
  involved	
  
are	
   not	
   clear.	
   The	
   Class	
   III	
   catalytic	
   subunit	
   Vps34	
   (Vacuolar	
   protein	
   sorting	
   34,	
   also	
   termed	
  
PIK3C3)	
   is	
   part	
   of	
   a	
   heterodimer	
   with	
   the	
   myristoylated	
   protein	
   Vps15,	
   that	
   is	
   located	
   in	
   the	
   cell	
  
membranes	
   and	
   form	
   larger	
   multi-­-protein	
   complexes	
   depending	
   on	
   the	
   particular	
   vesicle	
   traffic	
  
process	
   considered	
   (autophagy,	
   phagocytosis,	
   endosome	
   traffic).	
   Vps15	
   has	
   a	
   kinase	
   domain	
  
probably	
   inactive,	
   HEAT	
   domains	
   containing	
   anti-­-parallel	
   a-­-helices	
   involved	
   in	
   protein-­-protein	
  
interactions;	
  and	
  WD	
  repeats	
  that	
  serve	
  as	
  scaffolds	
  for	
  interaction	
  with	
  other	
  proteins.	
  

        Regulatory	
   subunits	
   inhibit	
   the	
   catalytic	
   activity	
   of	
   the	
   p110	
   subunits	
   but	
  
also	
   prevent	
   their	
   degradation.	
   Activation	
   of	
   PI3K	
   begins	
   upon	
   recruitment	
   of	
   the	
  
enzyme	
   complex	
   through	
   regulatory	
   subunits	
   to	
   the	
   inner	
   side	
   of	
   membrane	
  
bilayers	
   where	
   their	
   substrate	
   is	
   located,	
   and	
   where	
   interaction	
   with	
   the	
  
negatively	
  charged	
  surface	
  through	
  positively	
  charged	
  aminoacid	
  residues	
  further	
  
stabilizes	
   its	
   location.	
   This	
   is	
   followed	
   by	
   interaction	
   with	
   and	
   activation	
   of	
   the	
  

                                                                                                                             	
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